BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB028D03LP1|AL428889
(887 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig847 1750 0.0
>3x_Contig847
Length = 2949
Score = 1750 bits (883), Expect = 0.0
Identities = 886/887 (99%)
Strand = Plus / Minus
Query: 1 gatcccattttattctatgatgatttcattctatttgaagatgaattggcagacaacggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2299 gatcccattttattctatgatgatttcattctatttgaagatgaattggcagacaacggt 2240
Query: 61 atcagtatgctttcgataaaacttagggtaatggcagagagacttcttttattatgcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2239 atcagtatgctttcgataaaacttagggtaatggcagagagacttcttttattatgcaga 2180
Query: 121 ttcttcctaagagtcgatgaggtcttgtttaaaatcattgatacaagaatatatgtcgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2179 ttcttcctaagagtcgatgaggtcttgtttaaaatcattgatacaagaatatatgtcgaa 2120
Query: 181 ttcaatgaggaccttgttgtacgggaatggaaatatatggaggatgattacaagacagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2119 ttcaatgaggaccttgttgtacgggaatggaaatatatggaggatgattacaagacagta 2060
Query: 241 ttgaataaatgtagattaaattcaaacgatcctaagaaatctttgagagacagcaactgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2059 ttgaataaatgtagattaaattcaaacgatcctaagaaatctttgagagacagcaactgg 2000
Query: 301 gttgcgtctgtattacctttgaaggagcgcgtatgtgaagtattgaggaaaaaagaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1999 gttgcgtctgtattacctttgaaggagcgcgtatgtgaagtattgaggaaaaaagaagat 1940
Query: 361 atagaagaagttgtcgaataagcactcaccgctactgtcgaattgacagcacttttggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1939 atagaagaagttgtcgaataagcactcaccgctactgtcgaattgacagcacttttggaa 1880
Query: 421 aattcaagaaagagttgatttgctcattcatgaatctacctatttaattatgttacccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1879 aattcaagaaagagttgatttgctcattcatgaatctacctatttaattatgttacccaa 1820
Query: 481 aaggaataatatacaaatctcgtaatacatgtgataatattatatacacactattcaagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1819 aaggaataatatacaaatctcgtaatacatgtgataatattatatacacactattcaagt 1760
Query: 541 ttctgaatccaaaaggtatctggatacgttagtgatttctctgttatcattattttgctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1759 ttctgaatccaaaaggtatctggatacgttagtgatttctctgttatcattattttgctg 1700
Query: 601 aagttcttgcaattttcttacagctaattgagtgaattcaggttttttattcagtttctg 660
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1699 aagttcttgcaattttcttacagctaattgagttaattcaggttttttattcagtttctg 1640
Query: 661 agatgtcttcaatacaataccccaacctttcacgtaggcttctgccaactcaacagatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1639 agatgtcttcaatacaataccccaacctttcacgtaggcttctgccaactcaacagatct 1580
Query: 721 caacgcatttgataaacttgattgcaaagcagcttcagggtcagaatctgattgagactt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1579 caacgcatttgataaacttgattgcaaagcagcttcagggtcagaatctgattgagactt 1520
Query: 781 caagtaatgcaaataagctaattgaccaaatgcttcataactgaacggcaccccaattat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1519 caagtaatgcaaataagctaattgaccaaatgcttcataactgaacggcaccccaattat 1460
Query: 841 gacttcttccatgcaatatattgcttgacgtaggtccccagcctcct 887
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1459 gacttcttccatgcaatatattgcttgacgtaggtccccagcctcct 1413
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8012
Number of Sequences: 1807
Number of extensions: 8012
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 887
length of database: 10,358,551
effective HSP length: 16
effective length of query: 871
effective length of database: 10,329,639
effective search space: 8997115569
effective search space used: 8997115569
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)